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NMR structure determination of the 108kDa discoidal HDL particle

10th Edition of International Conference on Structural Biology
March 15-16 2018 Barcelona, Spain

Stefan Bibow, Polyhach Y, Eichmann C, Chi C N, Kowal J, Albiez S, McLeod R A, Stahlberg H, Jeschke G, Guntert P and Riek R

University of Basel, Switzerland ETH Zurich, Switzerland Goethe University Frankfurt, Germany

Scientific Tracks Abstracts: Biochem Mol biol J

Abstract:

High-density lipoprotein particles (HDLs) are transport containers in the circulatory system that receive cellular cholesterol and lipids destined for the liver and other lipoprotein particles. Because low levels of HDL-cholesterol often indicate an increased risk for cardiovascular diseases, HDL particles are considered as important pharmacological targets for therapeutic strategies. Mature spherical HDLs develop from lipid-free apolipoprotein apoA-I through the formation of intermediate discoidal HDL particles which are the primary acceptors of cellular cholesterol. Although of high biophysical and medical importance heterogeneity in density, size, shape, as well as protein and lipid composition prohibited a detailed molecular and structural description of discoidal HDL particles. Here, we present the three-dimensional solution structure of reconstituted discoidal HDL (rdHDL) particles by combining nuclear magnetic resonance (NMR), electron paramagnetic resonance (EPR) and transmission electron microscopy (TEM) data. By using amino acid selective labeling, methyl labeling, Lipid-PREs and long-range EPR data we found that rdHDL particles are composed of two helical apoA-I molecules that dimerise in an anti-parallel fashion to form a double belt around a lipid bilayer patch. The integrity of this unique structure is maintained by up to 28 salt bridges and an unusual zipper-like pattern of cation-�?�?�? interactions between helices 4 and 6. In order to accommodate a hydrophobic interior a gross �?¢�?�?�?�?right to right�?¢�?�?�?�? rotation of the helices upon lipidation is necessary. The structure relevant in our understanding of HDL-biology and metabolism reflects thereby the beauty and complexity of this type of biological shuttling container that is able to hold a fluid lipid/cholesterol interior at a protein lipid ratio of 1:50.

Biography :

Stefan Bibow has received his PhD in 2011 from the Max Planck Institute of Biophysical Chemistry in Göttingen, Germany. He moved to the ETH in Zurich in 2012 to start his postdoc in the group of Prof. Roland Riek. In 2017 he moved to the Biozentrum in Basel as a project leader. His main method is NMR which he uses to investigate the structure and dynamics of membrane and membrane associated proteins using nanodiscs.

Email:stefan.bibow@unibas.ch